Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm12774-201ENSMUST00000117881 416 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm16219-201ENSMUST00000120096 274 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm3945-201ENSMUST00000196637 683 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm17931-201ENSMUST00000208132 634 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm18621-201ENSMUST00000222677 679 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm5191-201ENSMUST00000222882 1236 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 AU015228-201ENSMUST00000121103 1320 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm24140-201ENSMUST00000122773 326 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm9578-201ENSMUST00000182354 753 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC164978.2-201ENSMUST00000226645 857 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm14760-201ENSMUST00000121831 999 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm37009-201ENSMUST00000193297 361 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Spg11Q3UHA3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm23458-201ENSMUST00000083257 169 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms