Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Rps4l-202ENSMUST00000204242 789 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 AY036118-201ENSMUST00000200021 923 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Brf2Q3UAW9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.04□□□□□ -0.64
Brf2Q3UAW9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.04□□□□□ -0.64
Brf2Q3UAW9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Brf2Q3UAW9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms