Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm44882-201ENSMUST00000205702 802 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm29245-201ENSMUST00000187332 1416 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm7001-201ENSMUST00000219384 1465 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm42840-201ENSMUST00000200303 2251 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm9637-201ENSMUST00000179141 873 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm4034-201ENSMUST00000187674 480 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm30652-201ENSMUST00000199103 430 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mir6239-201ENSMUST00000183564 105 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm42696-201ENSMUST00000199859 1142 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm18339-201ENSMUST00000218074 888 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 CT009509.1-201ENSMUST00000223855 466 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm44907-201ENSMUST00000207423 1633 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm15576-201ENSMUST00000117806 583 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm11489-201ENSMUST00000118342 499 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm5638-201ENSMUST00000118618 1258 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm6517-201ENSMUST00000121056 511 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm5435-201ENSMUST00000179295 1150 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 AC120406.1-201ENSMUST00000220362 482 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm8420-201ENSMUST00000097103 598 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 AC122858.2-201ENSMUST00000228571 1362 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm15383-201ENSMUST00000121889 1443 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms