Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm8111-201ENSMUST00000117659 987 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm15197-201ENSMUST00000120526 478 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm9162-201ENSMUST00000182081 991 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm43249-201ENSMUST00000200464 458 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm5599-201ENSMUST00000209602 788 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 BC106175-202ENSMUST00000219344 1213 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.89□□□□□ -0.19
Chrna5Q2MKA5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm25677-201ENSMUST00000174983 72 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm9507-202ENSMUST00000180157 654 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm5340-201ENSMUST00000203733 880 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm26670-202ENSMUST00000226862 340 ntBASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chrna5Q2MKA5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm11960-201ENSMUST00000122068 925 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm26976-201ENSMUST00000182929 908 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chrna5Q2MKA5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms