Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Mir7032-201ENSMUST00000185154 79 ntBASIC11.27□□□□□ -0.61
Hoxc4Q08624 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.27□□□□□ -0.61
Hoxc4Q08624 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm15549-201ENSMUST00000121595 622 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm22442-201ENSMUST00000157256 144 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm42518-201ENSMUST00000196277 938 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm5996-201ENSMUST00000211110 718 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm23105-201ENSMUST00000083719 134 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.26□□□□□ -0.61
Hoxc4Q08624 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc4Q08624 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm26013-201ENSMUST00000104404 119 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms