Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm22920-201ENSMUST00000102175 109 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm12899-201ENSMUST00000120565 551 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm6407-201ENSMUST00000176468 549 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm21092-201ENSMUST00000178995 955 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm29499-201ENSMUST00000189151 486 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm28329-201ENSMUST00000191208 689 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm29171-201ENSMUST00000191397 486 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm9645-201ENSMUST00000197131 792 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm5419-201ENSMUST00000119301 527 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm16071-201ENSMUST00000119589 793 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm1848-201ENSMUST00000120711 789 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Mir8115-201ENSMUST00000184992 119 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm17826-201ENSMUST00000189720 798 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm43186-201ENSMUST00000198130 824 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm18893-201ENSMUST00000198416 943 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.92□□□□□ -0.5
Ebf1Q07802 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf1Q07802 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf1Q07802 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 237.6 ms