Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Mir6998-201ENSMUST00000183343 64 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm3551-201ENSMUST00000190750 664 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.68□□□□□ -0.38
Col9a2Q07643 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col9a2Q07643 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a2Q07643 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a2Q07643 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm25148-201ENSMUST00000104611 123 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm11451-201ENSMUST00000118946 630 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm14942-201ENSMUST00000119642 336 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm6108-201ENSMUST00000208365 367 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.67□□□□□ -0.38
Col9a2Q07643 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.67□□□□□ -0.38
Col9a2Q07643 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.67□□□□□ -0.38
Col9a2Q07643 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a2Q07643 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col9a2Q07643 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms