Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm15595-201ENSMUST00000120840 961 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Mir6546-201ENSMUST00000184460 62 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm5714-201ENSMUST00000197343 566 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.32□□□□□ -0.44
Cntn3Q07409 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm12036-201ENSMUST00000120008 530 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Thoc7-209ENSMUST00000225325 765 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.31□□□□□ -0.44
Cntn3Q07409 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.31□□□□□ -0.44
Cntn3Q07409 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cntn3Q07409 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms