Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GabpaQ00422 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm13182-201ENSMUST00000122241 312 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm17877-201ENSMUST00000192578 814 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm17825-201ENSMUST00000206836 794 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm23105-201ENSMUST00000083719 134 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.29□□□□□ -0.28
GabpaQ00422 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GabpaQ00422 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.29□□□□□ -0.28
GabpaQ00422 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.29□□□□□ -0.28
GabpaQ00422 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GabpaQ00422 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
GabpaQ00422 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GabpaQ00422 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
GabpaQ00422 Gm25072-201ENSMUST00000175233 235 ntBASIC13.28□□□□□ -0.28
GabpaQ00422 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Gm8492-201ENSMUST00000182375 987 ntBASIC13.28□□□□□ -0.28
GabpaQ00422 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Gm8531-201ENSMUST00000188319 893 ntBASIC13.28□□□□□ -0.28
GabpaQ00422 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.28□□□□□ -0.28
GabpaQ00422 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.28□□□□□ -0.28
GabpaQ00422 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.28□□□□□ -0.28
GabpaQ00422 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.28□□□□□ -0.28
GabpaQ00422 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
GabpaQ00422 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.28□□□□□ -0.28
GabpaQ00422 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
GabpaQ00422 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
GabpaQ00422 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GabpaQ00422 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GabpaQ00422 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
GabpaQ00422 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GabpaQ00422 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GabpaQ00422 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GabpaQ00422 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.27□□□□□ -0.29
GabpaQ00422 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.27□□□□□ -0.29
GabpaQ00422 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Gm19009-201ENSMUST00000223072 823 ntBASIC13.27□□□□□ -0.29
GabpaQ00422 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.27□□□□□ -0.29
GabpaQ00422 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms