Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm15004-201ENSMUST00000119192 630 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm15610-201ENSMUST00000120584 195 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm24514-201ENSMUST00000174961 285 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.13□□□□□ -0.63
Nkx3-2P97503 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx3-2P97503 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm11663-201ENSMUST00000117888 290 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm22334-201ENSMUST00000158070 133 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm37835-201ENSMUST00000193305 361 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm9555-201ENSMUST00000200908 583 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm42790-201ENSMUST00000201268 969 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm35960-201ENSMUST00000202712 767 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm1821-202ENSMUST00000227415 750 ntBASIC11.12□□□□□ -0.63
Nkx3-2P97503 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx3-2P97503 Gm10288-201ENSMUST00000084614 537 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms