Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm11619-201ENSMUST00000117474 237 ntBASIC14.68□□□□□ -0.06
Smarcc1P97496 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm11578-201ENSMUST00000118530 459 ntBASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.68□□□□□ -0.06
Smarcc1P97496 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm5996-201ENSMUST00000211110 718 ntBASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smarcc1P97496 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc1P97496 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm9673-201ENSMUST00000119287 781 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm12791-201ENSMUST00000120788 655 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm22846-201ENSMUST00000157706 270 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm25554-201ENSMUST00000158075 113 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm6114-201ENSMUST00000182472 968 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcc1P97496 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.67□□□□□ -0.06
Smarcc1P97496 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc1P97496 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc1P97496 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Smarcc1P97496 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc1P97496 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc1P97496 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc1P97496 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.66□□□□□ -0.06
Smarcc1P97496 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcc1P97496 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms