Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm18201-201ENSMUST00000174735 875 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm5298-201ENSMUST00000201122 892 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.67□□□□□ -0.06
Nkx2-3P97334 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm12783-201ENSMUST00000121425 397 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm26047-201ENSMUST00000157308 113 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm9369-201ENSMUST00000196009 733 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm26047-202ENSMUST00000198840 115 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm8325-201ENSMUST00000099086 453 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.66□□□□□ -0.06
Nkx2-3P97334 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-3P97334 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm16219-201ENSMUST00000120096 274 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm22379-201ENSMUST00000157480 131 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-3P97334 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Lect2-202ENSMUST00000225183 823 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms