Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Gm14058-201ENSMUST00000116082 735 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm14724-201ENSMUST00000118400 537 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.51□□□□□ -0.73
SgcbP82349 Gm15207-201ENSMUST00000119259 442 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.51□□□□□ -0.73
SgcbP82349 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm26461-201ENSMUST00000175064 290 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm43138-201ENSMUST00000199123 708 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Gm6905-201ENSMUST00000205729 511 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
SgcbP82349 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.51□□□□□ -0.73
SgcbP82349 CT009495.1-201ENSMUST00000224221 862 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SgcbP82349 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.51□□□□□ -0.73
SgcbP82349 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SgcbP82349 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.51□□□□□ -0.73
SgcbP82349 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SgcbP82349 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcbP82349 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Gm18719-201ENSMUST00000196696 1413 ntBASIC10.5□□□□□ -0.73
SgcbP82349 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SgcbP82349 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Gm15515-201ENSMUST00000117827 822 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.5□□□□□ -0.73
SgcbP82349 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.5□□□□□ -0.73
SgcbP82349 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.5□□□□□ -0.73
SgcbP82349 Mir5120-201ENSMUST00000175020 78 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Gm25732-201ENSMUST00000175168 60 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
SgcbP82349 Gm43378-201ENSMUST00000199336 582 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Gm18753-201ENSMUST00000201000 566 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms