Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Six5P70178 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Six5P70178 Gm15236-201ENSMUST00000117309 379 ntBASIC10.99□□□□□ -0.65
Six5P70178 Gm11663-201ENSMUST00000117888 290 ntBASIC10.99□□□□□ -0.65
Six5P70178 Gm14208-201ENSMUST00000119645 678 ntBASIC10.99□□□□□ -0.65
Six5P70178 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Gm23085-201ENSMUST00000157849 293 ntBASIC10.99□□□□□ -0.65
Six5P70178 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.99□□□□□ -0.65
Six5P70178 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Six5P70178 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Gm8815-201ENSMUST00000173809 620 ntBASIC10.99□□□□□ -0.65
Six5P70178 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.99□□□□□ -0.65
Six5P70178 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.99□□□□□ -0.65
Six5P70178 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.99□□□□□ -0.65
Six5P70178 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.99□□□□□ -0.65
Six5P70178 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.99□□□□□ -0.65
Six5P70178 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.99□□□□□ -0.65
Six5P70178 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.99□□□□□ -0.65
Six5P70178 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Six5P70178 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Six5P70178 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.99□□□□□ -0.65
Six5P70178 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Six5P70178 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Six5P70178 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Six5P70178 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Six5P70178 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Six5P70178 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.98□□□□□ -0.65
Six5P70178 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.98□□□□□ -0.65
Six5P70178 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Six5P70178 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Six5P70178 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.98□□□□□ -0.65
Six5P70178 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Six5P70178 Mir8093-201ENSMUST00000185043 137 ntBASIC10.98□□□□□ -0.65
Six5P70178 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.98□□□□□ -0.65
Six5P70178 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.98□□□□□ -0.65
Six5P70178 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.98□□□□□ -0.65
Six5P70178 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.98□□□□□ -0.65
Six5P70178 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Six5P70178 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Six5P70178 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Six5P70178 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Six5P70178 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Six5P70178 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms