Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SmoP56726 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.78□□□□□ -0.52
SmoP56726 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.78□□□□□ -0.52
SmoP56726 Gm8737-201ENSMUST00000122208 642 ntBASIC11.78□□□□□ -0.52
SmoP56726 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.78□□□□□ -0.52
SmoP56726 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SmoP56726 Gm17391-201ENSMUST00000171036 126 ntBASIC11.78□□□□□ -0.52
SmoP56726 Gm23045-201ENSMUST00000175041 96 ntBASIC11.78□□□□□ -0.52
SmoP56726 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.78□□□□□ -0.52
SmoP56726 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Gm43186-201ENSMUST00000198130 824 ntBASIC11.78□□□□□ -0.52
SmoP56726 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 Gm4978-201ENSMUST00000071565 801 ntBASIC11.78□□□□□ -0.52
SmoP56726 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.78□□□□□ -0.52
SmoP56726 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SmoP56726 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.78□□□□□ -0.52
SmoP56726 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.78□□□□□ -0.52
SmoP56726 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SmoP56726 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.77□□□□□ -0.52
SmoP56726 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
SmoP56726 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
SmoP56726 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SmoP56726 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.77□□□□□ -0.53
SmoP56726 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.77□□□□□ -0.53
SmoP56726 Gm11949-201ENSMUST00000117640 372 ntBASIC11.77□□□□□ -0.53
SmoP56726 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.77□□□□□ -0.53
SmoP56726 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.77□□□□□ -0.53
SmoP56726 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Gm4654-201ENSMUST00000183305 982 ntBASIC11.77□□□□□ -0.53
SmoP56726 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Gm2517-201ENSMUST00000215651 348 ntBASIC11.77□□□□□ -0.53
SmoP56726 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.77□□□□□ -0.53
SmoP56726 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.77□□□□□ -0.53
SmoP56726 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SmoP56726 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SmoP56726 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms