Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm7851-201ENSMUST00000117574 323 ntBASIC11.72□□□□□ -0.53
Lim2P56563 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Gm15207-201ENSMUST00000119259 442 ntBASIC11.72□□□□□ -0.53
Lim2P56563 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.72□□□□□ -0.53
Lim2P56563 Gm38117-201ENSMUST00000194653 939 ntBASIC11.72□□□□□ -0.53
Lim2P56563 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.72□□□□□ -0.53
Lim2P56563 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Lim2P56563 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.72□□□□□ -0.53
Lim2P56563 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lim2P56563 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lim2P56563 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Lim2P56563 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lim2P56563 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lim2P56563 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Lim2P56563 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.71□□□□□ -0.53
Lim2P56563 Gm11941-201ENSMUST00000119904 610 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Gm8199-201ENSMUST00000121323 823 ntBASIC11.71□□□□□ -0.53
Lim2P56563 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.71□□□□□ -0.53
Lim2P56563 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lim2P56563 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Mir6979-201ENSMUST00000183927 56 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.71□□□□□ -0.53
Lim2P56563 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Gm43138-201ENSMUST00000199123 708 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.71□□□□□ -0.53
Lim2P56563 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lim2P56563 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.71□□□□□ -0.53
Lim2P56563 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Lim2P56563 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lim2P56563 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lim2P56563 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.71□□□□□ -0.54
Lim2P56563 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
Lim2P56563 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lim2P56563 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lim2P56563 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.7□□□□□ -0.54
Lim2P56563 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lim2P56563 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lim2P56563 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lim2P56563 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lim2P56563 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lim2P56563 Gm11700-201ENSMUST00000119409 403 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms