Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm23270-201ENSMUST00000104055 131 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm26286-201ENSMUST00000104166 134 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm37424-201ENSMUST00000191727 561 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm6439-201ENSMUST00000199849 862 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm43966-201ENSMUST00000203301 612 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm18054-201ENSMUST00000207539 555 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm45598-202ENSMUST00000210719 986 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.2□□□□□ -0.62
Cdkn2bP55271 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm11222-201ENSMUST00000119005 738 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm18187-201ENSMUST00000196476 984 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdkn2bP55271 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.19□□□□□ -0.62
Cdkn2bP55271 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdkn2bP55271 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdkn2bP55271 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.18□□□□□ -0.62
Cdkn2bP55271 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cdkn2bP55271 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdkn2bP55271 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdkn2bP55271 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdkn2bP55271 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms