Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ddx6P54823 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx6P54823 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm14892-201ENSMUST00000117636 267 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 Gm11500-201ENSMUST00000118237 601 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.92□□□□□ -0.5
Ddx6P54823 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm8531-201ENSMUST00000188319 893 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.92□□□□□ -0.5
Ddx6P54823 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm45594-201ENSMUST00000211717 241 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.92□□□□□ -0.5
Ddx6P54823 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx6P54823 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ddx6P54823 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.91□□□□□ -0.5
Ddx6P54823 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Ddx6P54823 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ddx6P54823 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm4294-201ENSMUST00000105169 614 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Gm16219-201ENSMUST00000120096 274 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.91□□□□□ -0.5
Ddx6P54823 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ddx6P54823 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.91□□□□□ -0.5
Ddx6P54823 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Mir6958-201ENSMUST00000184207 73 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm38314-201ENSMUST00000195709 625 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Gm5996-201ENSMUST00000211110 718 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.91□□□□□ -0.5
Ddx6P54823 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ddx6P54823 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.91□□□□□ -0.5
Ddx6P54823 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ddx6P54823 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.91□□□□□ -0.5
Ddx6P54823 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms