Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.02□□□□□ -0.49
Sox1P53783 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox1P53783 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sox1P53783 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox1P53783 Gm8019-201ENSMUST00000119317 587 ntBASIC12.01□□□□□ -0.49
Sox1P53783 AA623943-201ENSMUST00000121794 354 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox1P53783 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox1P53783 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox1P53783 Mir7035-201ENSMUST00000184713 82 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Gm43726-201ENSMUST00000199110 775 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox1P53783 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.01□□□□□ -0.49
Sox1P53783 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.01□□□□□ -0.49
Sox1P53783 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox1P53783 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox1P53783 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm9924-202ENSMUST00000192760 2311 ntBASIC12□□□□□ -0.49
Sox1P53783 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox1P53783 Gm23912-201ENSMUST00000104687 87 ntBASIC12□□□□□ -0.49
Sox1P53783 Mir453-201ENSMUST00000104732 82 ntBASIC12□□□□□ -0.49
Sox1P53783 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Gm11475-201ENSMUST00000118482 476 ntBASIC12□□□□□ -0.49
Sox1P53783 Gm12961-201ENSMUST00000120507 1050 ntBASIC12□□□□□ -0.49
Sox1P53783 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm26313-201ENSMUST00000157770 308 ntBASIC12□□□□□ -0.49
Sox1P53783 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm37207-201ENSMUST00000194284 296 ntBASIC12□□□□□ -0.49
Sox1P53783 Gm42660-201ENSMUST00000197733 947 ntBASIC12□□□□□ -0.49
Sox1P53783 Gm18035-201ENSMUST00000211962 589 ntBASIC12□□□□□ -0.49
Sox1P53783 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12□□□□□ -0.49
Sox1P53783 AC164556.1-201ENSMUST00000221318 751 ntBASIC12□□□□□ -0.49
Sox1P53783 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12□□□□□ -0.49
Sox1P53783 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12□□□□□ -0.49
Sox1P53783 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12□□□□□ -0.49
Sox1P53783 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm37324-201ENSMUST00000194500 4504 ntBASIC12□□□□□ -0.49
Sox1P53783 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox1P53783 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm37131-201ENSMUST00000192502 1561 ntBASIC12□□□□□ -0.49
Sox1P53783 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms