Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SftpdP50404 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SftpdP50404 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Gm12217-201ENSMUST00000118858 696 ntBASIC12.34□□□□□ -0.43
SftpdP50404 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SftpdP50404 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.34□□□□□ -0.43
SftpdP50404 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SftpdP50404 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SftpdP50404 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.34□□□□□ -0.43
SftpdP50404 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.34□□□□□ -0.43
SftpdP50404 Gm5714-201ENSMUST00000197343 566 ntBASIC12.34□□□□□ -0.43
SftpdP50404 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.34□□□□□ -0.43
SftpdP50404 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SftpdP50404 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.34□□□□□ -0.43
SftpdP50404 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
SftpdP50404 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpdP50404 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SftpdP50404 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SftpdP50404 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SftpdP50404 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
SftpdP50404 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SftpdP50404 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm23085-201ENSMUST00000157849 293 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SftpdP50404 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SftpdP50404 Mir6927-201ENSMUST00000184494 71 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Mir8093-201ENSMUST00000185043 137 ntBASIC12.33□□□□□ -0.44
SftpdP50404 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Gm5982-201ENSMUST00000196234 512 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Gm4482-201ENSMUST00000200876 742 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
SftpdP50404 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpdP50404 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
SftpdP50404 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Rgr-203ENSMUST00000225070 4704 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpdP50404 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.33□□□□□ -0.44
SftpdP50404 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms