Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Prox1P48437 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Gm24934-201ENSMUST00000103764 111 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Gm14999-201ENSMUST00000121039 624 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.28□□□□□ -0.6
Prox1P48437 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Prox1P48437 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.28□□□□□ -0.6
Prox1P48437 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.28□□□□□ -0.6
Prox1P48437 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Prox1P48437 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Gm6222-202ENSMUST00000182143 629 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Gm5370-201ENSMUST00000187187 574 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Prox1P48437 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Prox1P48437 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Prox1P48437 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Prox1P48437 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Prox1P48437 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prox1P48437 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.27□□□□□ -0.61
Prox1P48437 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Prox1P48437 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Prox1P48437 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Prox1P48437 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.27□□□□□ -0.61
Prox1P48437 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.27□□□□□ -0.61
Prox1P48437 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Prox1P48437 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.27□□□□□ -0.61
Prox1P48437 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.27□□□□□ -0.61
Prox1P48437 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.27□□□□□ -0.61
Prox1P48437 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.27□□□□□ -0.61
Prox1P48437 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prox1P48437 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.27□□□□□ -0.61
Prox1P48437 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms