Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm11628-201ENSMUST00000117568 171 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm12407-201ENSMUST00000180219 324 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm4654-201ENSMUST00000183305 982 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm43852-201ENSMUST00000202098 917 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.12□□□□□ -0.63
Nkx2-6P43688 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm16071-201ENSMUST00000119589 793 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm22442-201ENSMUST00000157256 144 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm10807-201ENSMUST00000177134 795 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm27910-201ENSMUST00000185004 107 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm17826-201ENSMUST00000189720 798 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.11□□□□□ -0.63
Nkx2-6P43688 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms