Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox18P43680 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Gm25604-201ENSMUST00000158359 133 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Gm15744-201ENSMUST00000161734 213 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Gm6047-201ENSMUST00000167221 574 ntBASIC11.5□□□□□ -0.57
Sox18P43680 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.5□□□□□ -0.57
Sox18P43680 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 AC158981.3-201ENSMUST00000226844 1024 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox18P43680 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox18P43680 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Gm7171-201ENSMUST00000177413 1349 ntBASIC11.5□□□□□ -0.57
Sox18P43680 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox18P43680 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox18P43680 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox18P43680 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Sox18P43680 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gm14193-201ENSMUST00000105067 153 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Gm24590-201ENSMUST00000116699 119 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Gm11979-201ENSMUST00000119629 743 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm24398-201ENSMUST00000157870 109 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC11.49□□□□□ -0.57
Sox18P43680 Gm37458-201ENSMUST00000194055 410 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Gm18460-201ENSMUST00000208088 464 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.49□□□□□ -0.57
Sox18P43680 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox18P43680 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms