Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.1□□□□□ -0.47
Msh2P43247 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Msh2P43247 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.1□□□□□ -0.47
Msh2P43247 Gm8885-201ENSMUST00000189382 598 ntBASIC12.1□□□□□ -0.47
Msh2P43247 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.1□□□□□ -0.47
Msh2P43247 Gm6082-201ENSMUST00000215204 454 ntBASIC12.1□□□□□ -0.47
Msh2P43247 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msh2P43247 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.1□□□□□ -0.47
Msh2P43247 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.1□□□□□ -0.47
Msh2P43247 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.1□□□□□ -0.47
Msh2P43247 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh2P43247 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.1□□□□□ -0.47
Msh2P43247 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Msh2P43247 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Gm25668-201ENSMUST00000157700 129 ntBASIC12.09□□□□□ -0.47
Msh2P43247 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.09□□□□□ -0.47
Msh2P43247 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Msh2P43247 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Msh2P43247 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.09□□□□□ -0.47
Msh2P43247 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.09□□□□□ -0.47
Msh2P43247 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Gm9996-201ENSMUST00000070359 913 ntBASIC12.09□□□□□ -0.47
Msh2P43247 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.09□□□□□ -0.47
Msh2P43247 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msh2P43247 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Msh2P43247 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.09□□□□□ -0.47
Msh2P43247 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.09□□□□□ -0.47
Msh2P43247 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh2P43247 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh2P43247 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Msh2P43247 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh2P43247 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh2P43247 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh2P43247 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh2P43247 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.08□□□□□ -0.48
Msh2P43247 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.08□□□□□ -0.48
Msh2P43247 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh2P43247 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms