Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.28□□□□□ -0.76
Upk2P38575 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.28□□□□□ -0.76
Upk2P38575 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Upk2P38575 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Upk2P38575 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.28□□□□□ -0.76
Upk2P38575 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Upk2P38575 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Upk2P38575 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Upk2P38575 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Upk2P38575 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Upk2P38575 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Upk2P38575 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Upk2P38575 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Upk2P38575 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Upk2P38575 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.27□□□□□ -0.77
Upk2P38575 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Gm11663-201ENSMUST00000117888 290 ntBASIC10.27□□□□□ -0.77
Upk2P38575 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.27□□□□□ -0.77
Upk2P38575 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Gm26047-201ENSMUST00000157308 113 ntBASIC10.27□□□□□ -0.77
Upk2P38575 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Gm26047-202ENSMUST00000198840 115 ntBASIC10.27□□□□□ -0.77
Upk2P38575 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.27□□□□□ -0.77
Upk2P38575 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.27□□□□□ -0.77
Upk2P38575 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.27□□□□□ -0.77
Upk2P38575 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Upk2P38575 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Upk2P38575 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Upk2P38575 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Upk2P38575 Mir877-201ENSMUST00000104738 85 ntBASIC10.26□□□□□ -0.77
Upk2P38575 Gm11500-201ENSMUST00000118237 601 ntBASIC10.26□□□□□ -0.77
Upk2P38575 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.26□□□□□ -0.77
Upk2P38575 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.26□□□□□ -0.77
Upk2P38575 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Upk2P38575 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.26□□□□□ -0.77
Upk2P38575 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Upk2P38575 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.26□□□□□ -0.77
Upk2P38575 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.26□□□□□ -0.77
Upk2P38575 Gm8385-201ENSMUST00000058999 643 ntBASIC10.26□□□□□ -0.77
Upk2P38575 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Upk2P38575 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Upk2P38575 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms