Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm11560-201ENSMUST00000117567 948 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm11578-201ENSMUST00000118530 459 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm13019-201ENSMUST00000120000 276 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm24248-201ENSMUST00000157321 322 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm20414-201ENSMUST00000172918 646 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm18776-201ENSMUST00000188833 654 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm43912-201ENSMUST00000204352 538 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm7082-201ENSMUST00000209880 969 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Gm10263-201ENSMUST00000085163 300 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.84□□□□□ -0.67
Sftpa1P35242 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.84□□□□□ -0.67
Sftpa1P35242 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sftpa1P35242 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sftpa1P35242 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Sftpa1P35242 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.83□□□□□ -0.68
Sftpa1P35242 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms