Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.11□□□□□ -0.79
Slc6a1P31648 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm13369-201ENSMUST00000119442 987 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm4768-201ENSMUST00000206199 686 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.1□□□□□ -0.79
Slc6a1P31648 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Slc6a1P31648 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Slc6a1P31648 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.09□□□□□ -0.79
Slc6a1P31648 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm7399-201ENSMUST00000032395 858 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm10254-201ENSMUST00000052888 867 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Gm10146-201ENSMUST00000072739 309 ntBASIC10.09□□□□□ -0.79
Slc6a1P31648 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Slc6a1P31648 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Slc6a1P31648 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms