Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.78□□□□□ -0.84
Col8a2P25318 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a2P25318 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a2P25318 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm11949-201ENSMUST00000117640 372 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm11783-201ENSMUST00000119549 885 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm13263-201ENSMUST00000121271 838 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm11960-201ENSMUST00000122068 925 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm5051-201ENSMUST00000204085 485 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm7940-201ENSMUST00000218195 769 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.78□□□□□ -0.84
Col8a2P25318 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a2P25318 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a2P25318 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a2P25318 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a2P25318 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a2P25318 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Col8a2P25318 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a2P25318 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a2P25318 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a2P25318 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm11667-201ENSMUST00000119828 486 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm24844-201ENSMUST00000158679 127 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm17391-201ENSMUST00000171036 126 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm8815-201ENSMUST00000173809 620 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm6905-201ENSMUST00000205729 511 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.77□□□□□ -0.85
Col8a2P25318 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Col8a2P25318 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Col8a2P25318 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms