Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Clk1P22518 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Clk1P22518 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.05□□□□□ -0.64
Clk1P22518 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.05□□□□□ -0.64
Clk1P22518 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Clk1P22518 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.05□□□□□ -0.64
Clk1P22518 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.05□□□□□ -0.64
Clk1P22518 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Gm43758-201ENSMUST00000199500 367 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Gm7783-201ENSMUST00000204795 781 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.05□□□□□ -0.64
Clk1P22518 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.05□□□□□ -0.64
Clk1P22518 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.05□□□□□ -0.64
Clk1P22518 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.05□□□□□ -0.64
Clk1P22518 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Clk1P22518 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Clk1P22518 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC11.05□□□□□ -0.64
Clk1P22518 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Clk1P22518 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clk1P22518 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Clk1P22518 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.04□□□□□ -0.64
Clk1P22518 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm22323-201ENSMUST00000103832 109 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Gm14723-201ENSMUST00000118686 215 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Gm12036-201ENSMUST00000120008 530 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Gm6334-201ENSMUST00000207083 228 ntBASIC11.04□□□□□ -0.64
Clk1P22518 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Clk1P22518 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Clk1P22518 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Clk1P22518 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Clk1P22518 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms