Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RaraP11416 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RaraP11416 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.67□□□□□ -0.38
RaraP11416 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
RaraP11416 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.67□□□□□ -0.38
RaraP11416 Gm11439-201ENSMUST00000118598 409 ntBASIC12.67□□□□□ -0.38
RaraP11416 Gm25116-201ENSMUST00000157191 122 ntBASIC12.67□□□□□ -0.38
RaraP11416 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RaraP11416 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Gm32999-201ENSMUST00000192693 562 ntBASIC12.67□□□□□ -0.38
RaraP11416 Rprl1-202ENSMUST00000198476 238 ntBASIC12.67□□□□□ -0.38
RaraP11416 Gm43962-201ENSMUST00000203898 190 ntBASIC12.67□□□□□ -0.38
RaraP11416 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.67□□□□□ -0.38
RaraP11416 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.67□□□□□ -0.38
RaraP11416 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.67□□□□□ -0.38
RaraP11416 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RaraP11416 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RaraP11416 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RaraP11416 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RaraP11416 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.67□□□□□ -0.38
RaraP11416 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.67□□□□□ -0.38
RaraP11416 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RaraP11416 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RaraP11416 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.66□□□□□ -0.38
RaraP11416 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.66□□□□□ -0.38
RaraP11416 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.66□□□□□ -0.38
RaraP11416 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.66□□□□□ -0.38
RaraP11416 Gm45224-201ENSMUST00000208203 414 ntBASIC12.66□□□□□ -0.38
RaraP11416 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.66□□□□□ -0.38
RaraP11416 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RaraP11416 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RaraP11416 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RaraP11416 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RaraP11416 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RaraP11416 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.65□□□□□ -0.38
RaraP11416 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RaraP11416 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms