Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.6□□□□□ -0.23
Col1a1P11087 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 Gm25998-201ENSMUST00000175397 53 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 Gm9162-201ENSMUST00000182081 991 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 Gm45094-201ENSMUST00000207013 617 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col1a1P11087 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.6□□□□□ -0.23
Col1a1P11087 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.59□□□□□ -0.23
Col1a1P11087 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Col1a1P11087 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.59□□□□□ -0.23
Col1a1P11087 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col1a1P11087 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.59□□□□□ -0.23
Col1a1P11087 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.59□□□□□ -0.23
Col1a1P11087 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col1a1P11087 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.59□□□□□ -0.23
Col1a1P11087 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.59□□□□□ -0.23
Col1a1P11087 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col1a1P11087 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col1a1P11087 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col1a1P11087 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm16459-201ENSMUST00000121443 686 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 Mir7035-201ENSMUST00000184713 82 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm42660-201ENSMUST00000197733 947 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm2448-201ENSMUST00000207080 559 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.58□□□□□ -0.24
Col1a1P11087 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.58□□□□□ -0.24
Col1a1P11087 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.58□□□□□ -0.24
Col1a1P11087 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms