Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl3P10855 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccl3P10855 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Ccl3P10855 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl3P10855 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl3P10855 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm4294-201ENSMUST00000105169 614 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl3P10855 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm4862-201ENSMUST00000170405 438 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Gm20392-201ENSMUST00000173047 701 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.33□□□□□ -0.76
Ccl3P10855 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl3P10855 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm18460-201ENSMUST00000208088 464 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm6722-201ENSMUST00000221586 390 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.33□□□□□ -0.76
Ccl3P10855 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.33□□□□□ -0.76
Ccl3P10855 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl3P10855 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl3P10855 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ccl3P10855 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.32□□□□□ -0.76
Ccl3P10855 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ccl3P10855 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms