Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NclP09405 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC17.41■□□□□ 0.38
NclP09405 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC17.41■□□□□ 0.38
NclP09405 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.41■□□□□ 0.38
NclP09405 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NclP09405 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.41■□□□□ 0.38
NclP09405 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NclP09405 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NclP09405 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Gm1840-201ENSMUST00000051687 1432 ntBASIC17.4■□□□□ 0.38
NclP09405 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC17.4■□□□□ 0.38
NclP09405 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NclP09405 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Gm10807-201ENSMUST00000177134 795 ntBASIC17.4■□□□□ 0.38
NclP09405 Mir7076-201ENSMUST00000183519 74 ntBASIC17.4■□□□□ 0.38
NclP09405 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC17.4■□□□□ 0.38
NclP09405 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.4■□□□□ 0.38
NclP09405 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC17.4■□□□□ 0.38
NclP09405 AC154257.1-202ENSMUST00000224729 843 ntBASIC17.4■□□□□ 0.38
NclP09405 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 CT573086.2-201ENSMUST00000227277 4992 ntBASIC17.4■□□□□ 0.38
NclP09405 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Gm1995-201ENSMUST00000220838 2602 ntBASIC17.4■□□□□ 0.38
NclP09405 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NclP09405 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NclP09405 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NclP09405 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NclP09405 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NclP09405 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.39■□□□□ 0.37
NclP09405 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NclP09405 Gm16071-201ENSMUST00000119589 793 ntBASIC17.39■□□□□ 0.37
NclP09405 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Gm8459-201ENSMUST00000162504 760 ntBASIC17.39■□□□□ 0.37
NclP09405 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NclP09405 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC17.39■□□□□ 0.37
NclP09405 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC17.39■□□□□ 0.37
NclP09405 Gm17826-201ENSMUST00000189720 798 ntBASIC17.39■□□□□ 0.37
NclP09405 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC17.39■□□□□ 0.37
NclP09405 Gm45219-201ENSMUST00000205602 465 ntBASIC17.39■□□□□ 0.37
NclP09405 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms