Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm13445-201ENSMUST00000121664 307 ntBASIC12.42□□□□□ -0.42
Hoxc8P09025 Gm16030-201ENSMUST00000159098 603 ntBASIC12.42□□□□□ -0.42
Hoxc8P09025 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Gm9369-201ENSMUST00000196009 733 ntBASIC12.42□□□□□ -0.42
Hoxc8P09025 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.42□□□□□ -0.42
Hoxc8P09025 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc8P09025 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.42□□□□□ -0.42
Hoxc8P09025 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc8P09025 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc8P09025 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm4862-201ENSMUST00000170405 438 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm17889-201ENSMUST00000198410 598 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Rubie-203ENSMUST00000227803 2430 ntBASIC12.41□□□□□ -0.42
Hoxc8P09025 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc8P09025 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc8P09025 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc8P09025 Mir1905-201ENSMUST00000122779 82 ntBASIC12.4□□□□□ -0.42
Hoxc8P09025 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc8P09025 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms