Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.1□□□□□ -0.63
ApoeP08226 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Snora73a-201ENSMUST00000082453 205 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.09□□□□□ -0.63
ApoeP08226 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ApoeP08226 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.09□□□□□ -0.63
ApoeP08226 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.09□□□□□ -0.63
ApoeP08226 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.09□□□□□ -0.63
ApoeP08226 Gm24845-201ENSMUST00000158034 109 ntBASIC11.09□□□□□ -0.63
ApoeP08226 Gm25043-201ENSMUST00000158604 212 ntBASIC11.09□□□□□ -0.63
ApoeP08226 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ApoeP08226 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ApoeP08226 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ApoeP08226 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.09□□□□□ -0.63
ApoeP08226 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.09□□□□□ -0.63
ApoeP08226 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ApoeP08226 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
ApoeP08226 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ApoeP08226 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
ApoeP08226 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ApoeP08226 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ApoeP08226 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.08□□□□□ -0.64
ApoeP08226 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Gm7722-201ENSMUST00000120646 741 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Gm13316-201ENSMUST00000140537 691 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ApoeP08226 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.08□□□□□ -0.64
ApoeP08226 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.08□□□□□ -0.64
ApoeP08226 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
ApoeP08226 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms