Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Gm22902-201ENSMUST00000158488 302 ntBASIC10.47□□□□□ -0.73
P06344 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.47□□□□□ -0.73
P06344 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.47□□□□□ -0.73
P06344 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Gm5714-201ENSMUST00000197343 566 ntBASIC10.47□□□□□ -0.73
P06344 Gm43947-201ENSMUST00000203019 959 ntBASIC10.47□□□□□ -0.73
P06344 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Ginm1-202ENSMUST00000065124 300 ntBASIC10.47□□□□□ -0.73
P06344 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.47□□□□□ -0.73
P06344 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.47□□□□□ -0.73
P06344 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P06344 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.46□□□□□ -0.73
P06344 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
P06344 Gm13408-201ENSMUST00000119822 798 ntBASIC10.46□□□□□ -0.73
P06344 Gm15432-201ENSMUST00000121106 195 ntBASIC10.46□□□□□ -0.73
P06344 Gm13935-201ENSMUST00000121859 798 ntBASIC10.46□□□□□ -0.73
P06344 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.46□□□□□ -0.73
P06344 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
P06344 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Gm9136-201ENSMUST00000193368 454 ntBASIC10.46□□□□□ -0.73
P06344 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.46□□□□□ -0.73
P06344 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.46□□□□□ -0.73
P06344 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.46□□□□□ -0.73
P06344 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.46□□□□□ -0.73
P06344 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
P06344 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P06344 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
P06344 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.46□□□□□ -0.74
P06344 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.46□□□□□ -0.74
P06344 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.46□□□□□ -0.74
P06344 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
P06344 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.45□□□□□ -0.74
P06344 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P06344 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P06344 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.45□□□□□ -0.74
P06344 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.45□□□□□ -0.74
P06344 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
P06344 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.45□□□□□ -0.74
P06344 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.45□□□□□ -0.74
P06344 Gm9192-201ENSMUST00000183221 985 ntBASIC10.45□□□□□ -0.74
P06344 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P06344 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
P06344 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.45□□□□□ -0.74
P06344 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.45□□□□□ -0.74
P06344 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.45□□□□□ -0.74
P06344 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.45□□□□□ -0.74
P06344 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P06344 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
P06344 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms