Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pknox1O70477 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pknox1O70477 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pknox1O70477 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pknox1O70477 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pknox1O70477 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.65□□□□□ -0.55
Pknox1O70477 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pknox1O70477 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.65□□□□□ -0.55
Pknox1O70477 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pknox1O70477 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.64□□□□□ -0.55
Pknox1O70477 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Gm32999-201ENSMUST00000192693 562 ntBASIC11.64□□□□□ -0.55
Pknox1O70477 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Rprl1-202ENSMUST00000198476 238 ntBASIC11.64□□□□□ -0.55
Pknox1O70477 Gm6334-201ENSMUST00000207083 228 ntBASIC11.64□□□□□ -0.55
Pknox1O70477 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.64□□□□□ -0.55
Pknox1O70477 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pknox1O70477 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pknox1O70477 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pknox1O70477 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pknox1O70477 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.63□□□□□ -0.55
Pknox1O70477 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm15004-201ENSMUST00000119192 630 ntBASIC11.63□□□□□ -0.55
Pknox1O70477 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.63□□□□□ -0.55
Pknox1O70477 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.63□□□□□ -0.55
Pknox1O70477 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm43962-201ENSMUST00000203898 190 ntBASIC11.63□□□□□ -0.55
Pknox1O70477 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.63□□□□□ -0.55
Pknox1O70477 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.63□□□□□ -0.55
Pknox1O70477 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pknox1O70477 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pknox1O70477 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Pknox1O70477 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.63□□□□□ -0.55
Pknox1O70477 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pknox1O70477 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Pknox1O70477 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Pknox1O70477 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pknox1O70477 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pknox1O70477 Gm26286-201ENSMUST00000104166 134 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms