Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm8197-202ENSMUST00000193422 934 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.9□□□□□ -0.34
Trdmt1O55055 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trdmt1O55055 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.9□□□□□ -0.35
Trdmt1O55055 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trdmt1O55055 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Trdmt1O55055 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm13549-201ENSMUST00000118339 796 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm8723-201ENSMUST00000166076 820 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm8701-201ENSMUST00000169259 874 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm38314-201ENSMUST00000195709 625 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm18968-201ENSMUST00000221319 862 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.89□□□□□ -0.35
Trdmt1O55055 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdmt1O55055 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.89□□□□□ -0.35
Trdmt1O55055 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms