Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
BckdkO55028 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
BckdkO55028 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.92□□□□□ -0.66
BckdkO55028 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BckdkO55028 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Gm15711-201ENSMUST00000118889 535 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Gm12380-201ENSMUST00000119012 544 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mir7677-201ENSMUST00000184226 67 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.91□□□□□ -0.66
BckdkO55028 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.91□□□□□ -0.66
BckdkO55028 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.91□□□□□ -0.66
BckdkO55028 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BckdkO55028 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
BckdkO55028 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Gm14263-201ENSMUST00000117955 746 ntBASIC10.9□□□□□ -0.66
BckdkO55028 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.9□□□□□ -0.66
BckdkO55028 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
BckdkO55028 Mir3547-201ENSMUST00000175461 88 ntBASIC10.9□□□□□ -0.66
BckdkO55028 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.9□□□□□ -0.66
BckdkO55028 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.9□□□□□ -0.66
BckdkO55028 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BckdkO55028 Gm7848-201ENSMUST00000210739 718 ntBASIC10.9□□□□□ -0.66
BckdkO55028 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.9□□□□□ -0.66
BckdkO55028 Gm17827-201ENSMUST00000211825 742 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms