Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 Gm11500-201ENSMUST00000118237 601 ntBASIC12.73□□□□□ -0.37
Clk2O35491 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.73□□□□□ -0.37
Clk2O35491 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.73□□□□□ -0.37
Clk2O35491 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.73□□□□□ -0.37
Clk2O35491 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.73□□□□□ -0.37
Clk2O35491 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.73□□□□□ -0.37
Clk2O35491 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clk2O35491 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.73□□□□□ -0.37
Clk2O35491 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Clk2O35491 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clk2O35491 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk2O35491 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clk2O35491 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Clk2O35491 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Gm15615-201ENSMUST00000118876 198 ntBASIC12.72□□□□□ -0.37
Clk2O35491 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Mir7032-201ENSMUST00000185154 79 ntBASIC12.72□□□□□ -0.37
Clk2O35491 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.72□□□□□ -0.37
Clk2O35491 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.72□□□□□ -0.37
Clk2O35491 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clk2O35491 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.72□□□□□ -0.37
Clk2O35491 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk2O35491 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Clk2O35491 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.72□□□□□ -0.37
Clk2O35491 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk2O35491 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clk2O35491 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clk2O35491 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.71□□□□□ -0.37
Clk2O35491 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.71□□□□□ -0.37
Clk2O35491 Gm12247-201ENSMUST00000117585 670 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Gm14071-201ENSMUST00000117817 509 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.71□□□□□ -0.37
Clk2O35491 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clk2O35491 Gm44315-201ENSMUST00000203041 219 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Gm17825-201ENSMUST00000206836 794 ntBASIC12.71□□□□□ -0.37
Clk2O35491 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clk2O35491 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk2O35491 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.71□□□□□ -0.37
Clk2O35491 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms