Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.9□□□□□ -0.82
Prrt1O35449 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.9□□□□□ -0.82
Prrt1O35449 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Prrt1O35449 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.9□□□□□ -0.82
Prrt1O35449 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.9□□□□□ -0.82
Prrt1O35449 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Prrt1O35449 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
Prrt1O35449 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.9□□□□□ -0.82
Prrt1O35449 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Prrt1O35449 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Prrt1O35449 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Prrt1O35449 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.9□□□□□ -0.82
Prrt1O35449 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Prrt1O35449 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Prrt1O35449 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.9□□□□□ -0.83
Prrt1O35449 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.9□□□□□ -0.83
Prrt1O35449 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Prrt1O35449 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Prrt1O35449 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Prrt1O35449 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Prrt1O35449 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.9□□□□□ -0.83
Prrt1O35449 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Prrt1O35449 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
Prrt1O35449 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.89□□□□□ -0.83
Prrt1O35449 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 Gm14057-201ENSMUST00000120631 482 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.89□□□□□ -0.83
Prrt1O35449 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Prrt1O35449 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Gm24196-201ENSMUST00000179161 110 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.89□□□□□ -0.83
Prrt1O35449 Gm44872-201ENSMUST00000207864 420 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.89□□□□□ -0.83
Prrt1O35449 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Prrt1O35449 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Prrt1O35449 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Prrt1O35449 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.89□□□□□ -0.83
Prrt1O35449 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.88□□□□□ -0.83
Prrt1O35449 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.88□□□□□ -0.83
Prrt1O35449 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms