Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm6606-201ENSMUST00000193613 947 ntBASIC17.74■□□□□ 0.43
Polr1aO35134 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Polr1aO35134 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Gm42941-201ENSMUST00000200347 1321 ntBASIC17.74■□□□□ 0.43
Polr1aO35134 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.73■□□□□ 0.43
Polr1aO35134 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Polr1aO35134 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.73■□□□□ 0.43
Polr1aO35134 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Olfr692-202ENSMUST00000217827 1126 ntBASIC17.73■□□□□ 0.43
Polr1aO35134 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Polr1aO35134 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC17.73■□□□□ 0.43
Polr1aO35134 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Polr1aO35134 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Polr1aO35134 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Polr1aO35134 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr1aO35134 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Polr1aO35134 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Mir432-201ENSMUST00000157230 75 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Ighv1-2-201ENSMUST00000195325 378 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 AC134601.2-201ENSMUST00000221071 130 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 AC164429.1-201ENSMUST00000224210 518 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 AC142266.1-201ENSMUST00000228107 415 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 n-R5s71-201ENSMUST00000093668 119 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Polr1aO35134 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 AC157950.1-201ENSMUST00000217561 2168 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Mup-ps29-201ENSMUST00000122281 202 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC17.72■□□□□ 0.43
Polr1aO35134 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC17.72■□□□□ 0.43
Polr1aO35134 Gm6641-201ENSMUST00000196100 1315 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Gm45135-201ENSMUST00000206787 1184 ntBASIC17.72■□□□□ 0.43
Polr1aO35134 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr1aO35134 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Polr1aO35134 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Gm43167-201ENSMUST00000202001 1606 ntBASIC17.71■□□□□ 0.43
Polr1aO35134 Gm43152-201ENSMUST00000202495 1638 ntBASIC17.71■□□□□ 0.43
Polr1aO35134 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Polr1aO35134 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Gm16459-201ENSMUST00000121443 686 ntBASIC17.71■□□□□ 0.43
Polr1aO35134 Gm43275-201ENSMUST00000202053 1020 ntBASIC17.71■□□□□ 0.43
Polr1aO35134 Gm45094-201ENSMUST00000207013 617 ntBASIC17.71■□□□□ 0.43
Polr1aO35134 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Polr1aO35134 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Polr1aO35134 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms