Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Snora73b-201ENSMUST00000083419 205 ntBASIC12.23□□□□□ -0.45
Ebf3O08791 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf3O08791 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ebf3O08791 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf3O08791 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf3O08791 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf3O08791 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ebf3O08791 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.22□□□□□ -0.45
Ebf3O08791 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm16397-201ENSMUST00000122201 494 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm18893-201ENSMUST00000198416 943 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf3O08791 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.22□□□□□ -0.45
Ebf3O08791 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf3O08791 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.21□□□□□ -0.45
Ebf3O08791 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf3O08791 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ebf3O08791 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf3O08791 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ebf3O08791 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf3O08791 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf3O08791 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ebf3O08791 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 Gm15004-201ENSMUST00000119192 630 ntBASIC12.21□□□□□ -0.45
Ebf3O08791 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf3O08791 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.21□□□□□ -0.45
Ebf3O08791 Gm23771-201ENSMUST00000178702 110 ntBASIC12.21□□□□□ -0.45
Ebf3O08791 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.21□□□□□ -0.45
Ebf3O08791 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.21□□□□□ -0.45
Ebf3O08791 Gm27910-201ENSMUST00000185004 107 ntBASIC12.21□□□□□ -0.45
Ebf3O08791 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.21□□□□□ -0.45
Ebf3O08791 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.21□□□□□ -0.45
Ebf3O08791 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms