Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm22323-201ENSMUST00000103832 109 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm13350-201ENSMUST00000120519 479 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm7584-201ENSMUST00000175829 940 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm27320-201ENSMUST00000184892 109 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm807-202ENSMUST00000224929 408 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm5705-201ENSMUST00000066241 711 ntBASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm28719-201ENSMUST00000187779 1757 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm18065-201ENSMUST00000221395 526 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gm13347-201ENSMUST00000120298 1353 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12□□□□□ -0.49
Pcdh9F8VPK8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh9F8VPK8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm2553-201ENSMUST00000215986 605 ntBASIC11.99□□□□□ -0.49
Pcdh9F8VPK8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms