Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm25554-201ENSMUST00000158075 113 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm8197-202ENSMUST00000193422 934 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm5298-201ENSMUST00000201122 892 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.04□□□□□ -0.16
Ube4aE9Q735 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.04□□□□□ -0.16
Ube4aE9Q735 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.04□□□□□ -0.16
Ube4aE9Q735 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm25517-201ENSMUST00000083865 134 ntBASIC14.04□□□□□ -0.16
Ube4aE9Q735 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4aE9Q735 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm15528-201ENSMUST00000117821 864 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm14219-201ENSMUST00000120414 288 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm12030-201ENSMUST00000121917 223 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm12628-201ENSMUST00000122193 382 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm23218-201ENSMUST00000158124 276 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm6407-201ENSMUST00000176468 549 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm37284-201ENSMUST00000193607 539 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm45120-201ENSMUST00000208880 408 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.03□□□□□ -0.16
Ube4aE9Q735 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4aE9Q735 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms