Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm5706-201ENSMUST00000181525 993 ntBASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh17E9PXF0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm15573-201ENSMUST00000119487 540 ntBASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm8815-201ENSMUST00000173809 620 ntBASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pcdh17E9PXF0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms