Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm22711-201ENSMUST00000116890 133 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm12036-201ENSMUST00000120008 530 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm3150-201ENSMUST00000166418 204 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm21092-201ENSMUST00000178995 955 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm12407-201ENSMUST00000180219 324 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Mir7076-201ENSMUST00000183519 74 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm38151-201ENSMUST00000195085 289 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm45113-201ENSMUST00000207518 165 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srp54bE9PXC0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm12516-201ENSMUST00000120819 385 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm26047-201ENSMUST00000157308 113 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm9358-201ENSMUST00000183067 927 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm28937-201ENSMUST00000185413 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm29400-201ENSMUST00000187208 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm28662-201ENSMUST00000188446 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm28251-201ENSMUST00000188835 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm37318-201ENSMUST00000194325 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm38017-201ENSMUST00000194768 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm37287-201ENSMUST00000195449 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm37793-201ENSMUST00000195548 695 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm26047-202ENSMUST00000198840 115 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms