Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm7722-201ENSMUST00000120646 741 ntBASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm18893-201ENSMUST00000198416 943 ntBASIC13.38□□□□□ -0.27
Syce3B5KM66 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.38□□□□□ -0.27
Syce3B5KM66 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC13.38□□□□□ -0.27
Syce3B5KM66 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syce3B5KM66 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syce3B5KM66 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 AC154171.2-201ENSMUST00000225219 2652 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm9192-201ENSMUST00000183221 985 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm9996-201ENSMUST00000070359 913 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.37□□□□□ -0.27
Syce3B5KM66 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.37□□□□□ -0.27
Syce3B5KM66 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syce3B5KM66 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Syce3B5KM66 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Syce3B5KM66 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Syce3B5KM66 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Syce3B5KM66 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syce3B5KM66 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.36□□□□□ -0.27
Syce3B5KM66 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms