Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm23949-201ENSMUST00000104027 127 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm4310-201ENSMUST00000177847 889 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm28937-201ENSMUST00000185413 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm29400-201ENSMUST00000187208 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm28662-201ENSMUST00000188446 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm28251-201ENSMUST00000188835 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm37318-201ENSMUST00000194325 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm38017-201ENSMUST00000194768 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm37287-201ENSMUST00000195449 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm37793-201ENSMUST00000195548 695 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm43002-201ENSMUST00000200310 155 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm28686-201ENSMUST00000187404 609 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb2S4R1M3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb2S4R1M3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms