Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk1bQ9Z2C6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk1bQ9Z2C6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk1bQ9Z2C6 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk1bQ9Z2C6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm13316-201ENSMUST00000140537 691 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm24845-201ENSMUST00000158034 109 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm25043-201ENSMUST00000158604 212 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm40466-201ENSMUST00000212174 422 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Snora73a-201ENSMUST00000082453 205 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk1bQ9Z2C6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk1bQ9Z2C6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms